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Nat Methods ; 18(12): 1532-1541, 2021 12.
Article in English | MEDLINE | ID: covidwho-1504972

ABSTRACT

Imaging intact human organs from the organ to the cellular scale in three dimensions is a goal of biomedical imaging. To meet this challenge, we developed hierarchical phase-contrast tomography (HiP-CT), an X-ray phase propagation technique using the European Synchrotron Radiation Facility (ESRF)'s Extremely Brilliant Source (EBS). The spatial coherence of the ESRF-EBS combined with our beamline equipment, sample preparation and scanning developments enabled us to perform non-destructive, three-dimensional (3D) scans with hierarchically increasing resolution at any location in whole human organs. We applied HiP-CT to image five intact human organ types: brain, lung, heart, kidney and spleen. HiP-CT provided a structural overview of each whole organ followed by multiple higher-resolution volumes of interest, capturing organotypic functional units and certain individual specialized cells within intact human organs. We demonstrate the potential applications of HiP-CT through quantification and morphometry of glomeruli in an intact human kidney and identification of regional changes in the tissue architecture in a lung from a deceased donor with coronavirus disease 2019 (COVID-19).


Subject(s)
COVID-19/pathology , Image Processing, Computer-Assisted/methods , Imaging, Three-Dimensional/methods , Lung/pathology , SARS-CoV-2 , Tomography, X-Ray Computed/methods , Humans , Kidney/anatomy & histology , Synchrotrons
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